Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.13■□□□□ 0.01
Ubp1Q811S7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ubp1Q811S7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.12■□□□□ 0.01
Ubp1Q811S7 Gm5682-201ENSMUST00000173402 505 ntBASIC15.12■□□□□ 0.01
Ubp1Q811S7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.12■□□□□ 0.01
Ubp1Q811S7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubp1Q811S7 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm18733-201ENSMUST00000173950 856 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm15823-201ENSMUST00000064305 670 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Gm15590-201ENSMUST00000078419 552 ntBASIC15.11■□□□□ 0.01
Ubp1Q811S7 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubp1Q811S7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubp1Q811S7 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms