Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gm7488-201ENSMUST00000117148 684 ntBASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gm14767-201ENSMUST00000121559 586 ntBASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gm14719-201ENSMUST00000121891 340 ntBASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gm15487-201ENSMUST00000122373 465 ntBASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx55Q6ZPL9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Gm27680-201ENSMUST00000184192 160 ntBASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Ddx55Q6ZPL9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ddx55Q6ZPL9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Gm27533-201ENSMUST00000183800 152 ntBASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Gm7775-201ENSMUST00000218871 853 ntBASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ddx55Q6ZPL9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
Ddx55Q6ZPL9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms