Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.19■□□□□ 0.34
Usp49Q6P9L4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Gm9768-201ENSMUST00000206007 2861 ntBASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Usp49Q6P9L4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gm11452-201ENSMUST00000122376 690 ntBASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gm6376-201ENSMUST00000209407 580 ntBASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.17■□□□□ 0.34
Usp49Q6P9L4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Usp49Q6P9L4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp49Q6P9L4 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.15■□□□□ 0.34
Usp49Q6P9L4 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms