Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Gm44333-201ENSMUST00000197168 107 ntBASIC19.9■□□□□ 0.78
Ccne1Q61457 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccne1Q61457 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC19.9■□□□□ 0.78
Ccne1Q61457 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ccne1Q61457 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccne1Q61457 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC19.89■□□□□ 0.78
Ccne1Q61457 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccne1Q61457 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ccne1Q61457 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Ccne1Q61457 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccne1Q61457 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.89■□□□□ 0.77
Ccne1Q61457 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccne1Q61457 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccne1Q61457 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.88■□□□□ 0.77
Ccne1Q61457 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.88■□□□□ 0.77
Ccne1Q61457 Gm15483-201ENSMUST00000120338 456 ntBASIC19.88■□□□□ 0.77
Ccne1Q61457 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.88■□□□□ 0.77
Ccne1Q61457 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ccne1Q61457 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.88■□□□□ 0.77
Ccne1Q61457 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ccne1Q61457 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccne1Q61457 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.87■□□□□ 0.77
Ccne1Q61457 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccne1Q61457 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Ccne1Q61457 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Gm2810-201ENSMUST00000118681 990 ntBASIC19.86■□□□□ 0.77
Ccne1Q61457 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
Ccne1Q61457 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccne1Q61457 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms