Protein–RNA interactions for Protein: Q61239

Fnta, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FntaQ61239 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.27■□□□□ 0.2
FntaQ61239 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
FntaQ61239 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
FntaQ61239 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FntaQ61239 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FntaQ61239 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
FntaQ61239 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FntaQ61239 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
FntaQ61239 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.26■□□□□ 0.19
FntaQ61239 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.26■□□□□ 0.19
FntaQ61239 Gm10252-201ENSMUST00000209541 832 ntBASIC16.26■□□□□ 0.19
FntaQ61239 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
FntaQ61239 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FntaQ61239 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FntaQ61239 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FntaQ61239 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
FntaQ61239 Gm6433-201ENSMUST00000118634 875 ntBASIC16.25■□□□□ 0.19
FntaQ61239 Gm15565-201ENSMUST00000118890 427 ntBASIC16.25■□□□□ 0.19
FntaQ61239 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.25■□□□□ 0.19
FntaQ61239 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.25■□□□□ 0.19
FntaQ61239 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FntaQ61239 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
FntaQ61239 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.25■□□□□ 0.19
FntaQ61239 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.25■□□□□ 0.19
FntaQ61239 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FntaQ61239 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FntaQ61239 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FntaQ61239 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FntaQ61239 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.24■□□□□ 0.19
FntaQ61239 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FntaQ61239 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.24■□□□□ 0.19
FntaQ61239 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
FntaQ61239 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FntaQ61239 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FntaQ61239 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms