Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.75□□□□□ -0.05
ClpbQ60649 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ClpbQ60649 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ClpbQ60649 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Gm7230-201ENSMUST00000173026 815 ntBASIC14.74□□□□□ -0.05
ClpbQ60649 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.74□□□□□ -0.05
ClpbQ60649 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Gm43514-201ENSMUST00000198852 424 ntBASIC14.74□□□□□ -0.05
ClpbQ60649 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.74□□□□□ -0.05
ClpbQ60649 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
ClpbQ60649 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
ClpbQ60649 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ClpbQ60649 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ClpbQ60649 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.73□□□□□ -0.05
ClpbQ60649 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.73□□□□□ -0.05
ClpbQ60649 Mir5131-201ENSMUST00000175426 93 ntBASIC14.73□□□□□ -0.05
ClpbQ60649 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.73□□□□□ -0.05
ClpbQ60649 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.73□□□□□ -0.05
ClpbQ60649 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.73□□□□□ -0.05
ClpbQ60649 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.73□□□□□ -0.05
ClpbQ60649 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.73□□□□□ -0.05
ClpbQ60649 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.73□□□□□ -0.05
ClpbQ60649 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ClpbQ60649 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
ClpbQ60649 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
ClpbQ60649 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ClpbQ60649 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
ClpbQ60649 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
ClpbQ60649 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Gm15173-201ENSMUST00000122049 433 ntBASIC14.72□□□□□ -0.05
ClpbQ60649 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.72□□□□□ -0.05
ClpbQ60649 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
ClpbQ60649 Gm18622-201ENSMUST00000219361 595 ntBASIC14.72□□□□□ -0.05
ClpbQ60649 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ClpbQ60649 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
ClpbQ60649 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
ClpbQ60649 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
ClpbQ60649 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.71□□□□□ -0.05
ClpbQ60649 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
ClpbQ60649 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
ClpbQ60649 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms