Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcbP82349 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SgcbP82349 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.69□□□□□ -0.22
SgcbP82349 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.69□□□□□ -0.22
SgcbP82349 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SgcbP82349 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
SgcbP82349 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SgcbP82349 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Gm14722-201ENSMUST00000118943 689 ntBASIC13.68□□□□□ -0.22
SgcbP82349 Gm1401-201ENSMUST00000122048 772 ntBASIC13.68□□□□□ -0.22
SgcbP82349 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.68□□□□□ -0.22
SgcbP82349 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.68□□□□□ -0.22
SgcbP82349 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Gm5682-201ENSMUST00000173402 505 ntBASIC13.68□□□□□ -0.22
SgcbP82349 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.68□□□□□ -0.22
SgcbP82349 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.68□□□□□ -0.22
SgcbP82349 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.68□□□□□ -0.22
SgcbP82349 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SgcbP82349 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SgcbP82349 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.68□□□□□ -0.22
SgcbP82349 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.68□□□□□ -0.22
SgcbP82349 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SgcbP82349 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.67□□□□□ -0.22
SgcbP82349 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Gm18489-201ENSMUST00000172565 551 ntBASIC13.67□□□□□ -0.22
SgcbP82349 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Gm27628-201ENSMUST00000184911 107 ntBASIC13.67□□□□□ -0.22
SgcbP82349 Gm43514-201ENSMUST00000198852 424 ntBASIC13.67□□□□□ -0.22
SgcbP82349 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SgcbP82349 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SgcbP82349 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.66□□□□□ -0.22
SgcbP82349 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SgcbP82349 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SgcbP82349 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SgcbP82349 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
SgcbP82349 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.66□□□□□ -0.22
SgcbP82349 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.66□□□□□ -0.22
SgcbP82349 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms