Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Sssca1P56873 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.42□□□□□ -0.42
Sssca1P56873 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.42□□□□□ -0.42
Sssca1P56873 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.42□□□□□ -0.42
Sssca1P56873 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.42□□□□□ -0.42
Sssca1P56873 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 AC125350.1-201ENSMUST00000225115 903 ntBASIC12.42□□□□□ -0.42
Sssca1P56873 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sssca1P56873 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Sssca1P56873 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.42□□□□□ -0.42
Sssca1P56873 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.42□□□□□ -0.42
Sssca1P56873 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Sssca1P56873 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC12.41□□□□□ -0.42
Sssca1P56873 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Gm6623-201ENSMUST00000173570 544 ntBASIC12.41□□□□□ -0.42
Sssca1P56873 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Sssca1P56873 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Sssca1P56873 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.41□□□□□ -0.42
Sssca1P56873 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Sssca1P56873 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Sssca1P56873 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Sssca1P56873 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Sssca1P56873 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.4□□□□□ -0.42
Sssca1P56873 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sssca1P56873 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Sssca1P56873 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Sssca1P56873 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Sssca1P56873 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Sssca1P56873 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Sssca1P56873 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Sssca1P56873 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Sssca1P56873 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms