Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.23■□□□□ 0.03
Atxn1P54254 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Atxn1P54254 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Atxn1P54254 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.22■□□□□ 0.03
Atxn1P54254 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.22■□□□□ 0.03
Atxn1P54254 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.22■□□□□ 0.03
Atxn1P54254 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.22■□□□□ 0.03
Atxn1P54254 Rprl2-201ENSMUST00000157150 290 ntBASIC15.22■□□□□ 0.03
Atxn1P54254 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.22■□□□□ 0.03
Atxn1P54254 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.22■□□□□ 0.03
Atxn1P54254 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Atxn1P54254 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Atxn1P54254 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Atxn1P54254 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Atxn1P54254 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.21■□□□□ 0.03
Atxn1P54254 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Atxn1P54254 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.21■□□□□ 0.03
Atxn1P54254 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Atxn1P54254 Gm27430-201ENSMUST00000184585 107 ntBASIC15.21■□□□□ 0.03
Atxn1P54254 Gm44333-201ENSMUST00000197168 107 ntBASIC15.21■□□□□ 0.03
Atxn1P54254 Gm7774-201ENSMUST00000200064 533 ntBASIC15.21■□□□□ 0.03
Atxn1P54254 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.21■□□□□ 0.03
Atxn1P54254 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.21■□□□□ 0.03
Atxn1P54254 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.21■□□□□ 0.03
Atxn1P54254 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atxn1P54254 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Atxn1P54254 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.21■□□□□ 0.02
Atxn1P54254 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atxn1P54254 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Atxn1P54254 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atxn1P54254 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atxn1P54254 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atxn1P54254 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atxn1P54254 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.2■□□□□ 0.02
Atxn1P54254 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atxn1P54254 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms