Protein–RNA interactions for Protein: P50446

Krt6a, Keratin, type II cytoskeletal 6A, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt6aP50446 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Rprl3-201ENSMUST00000157400 290 ntBASIC15.26■□□□□ 0.03
Krt6aP50446 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.26■□□□□ 0.03
Krt6aP50446 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Gm9172-201ENSMUST00000212092 954 ntBASIC15.26■□□□□ 0.03
Krt6aP50446 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.26■□□□□ 0.03
Krt6aP50446 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Krt6aP50446 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Krt6aP50446 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.26■□□□□ 0.03
Krt6aP50446 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Krt6aP50446 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.25■□□□□ 0.03
Krt6aP50446 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Krt6aP50446 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Krt6aP50446 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC15.25■□□□□ 0.03
Krt6aP50446 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Krt6aP50446 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Krt6aP50446 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.25■□□□□ 0.03
Krt6aP50446 Gm14722-201ENSMUST00000118943 689 ntBASIC15.25■□□□□ 0.03
Krt6aP50446 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.25■□□□□ 0.03
Krt6aP50446 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Krt6aP50446 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Krt6aP50446 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Krt6aP50446 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt6aP50446 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
Krt6aP50446 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.24■□□□□ 0.03
Krt6aP50446 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Krt6aP50446 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.24■□□□□ 0.03
Krt6aP50446 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Krt6aP50446 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Krt6aP50446 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.24■□□□□ 0.03
Krt6aP50446 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt6aP50446 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Krt6aP50446 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Krt6aP50446 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.23■□□□□ 0.03
Krt6aP50446 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Krt6aP50446 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt6aP50446 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Krt6aP50446 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms