Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Sox2P48432 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox2P48432 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.41□□□□□ -0.1
Sox2P48432 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Sox2P48432 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sox2P48432 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sox2P48432 Mir770-201ENSMUST00000103252 94 ntBASIC14.41□□□□□ -0.1
Sox2P48432 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.41□□□□□ -0.1
Sox2P48432 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.41□□□□□ -0.1
Sox2P48432 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sox2P48432 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sox2P48432 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.41□□□□□ -0.1
Sox2P48432 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Sox2P48432 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sox2P48432 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox2P48432 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.4□□□□□ -0.1
Sox2P48432 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Sox2P48432 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sox2P48432 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox2P48432 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Gm18101-201ENSMUST00000215769 548 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sox2P48432 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.39□□□□□ -0.11
Sox2P48432 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.39□□□□□ -0.11
Sox2P48432 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sox2P48432 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Sox2P48432 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sox2P48432 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox2P48432 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox2P48432 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Sox2P48432 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.38□□□□□ -0.11
Sox2P48432 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.38□□□□□ -0.11
Sox2P48432 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Sox2P48432 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sox2P48432 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms