Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Xcl1P47993 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Xcl1P47993 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Gm43137-201ENSMUST00000198052 594 ntBASIC10.01□□□□□ -0.81
Xcl1P47993 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Xcl1P47993 AC140264.2-202ENSMUST00000218746 817 ntBASIC10.01□□□□□ -0.81
Xcl1P47993 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.01□□□□□ -0.81
Xcl1P47993 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC10.01□□□□□ -0.81
Xcl1P47993 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.01□□□□□ -0.81
Xcl1P47993 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC10.01□□□□□ -0.81
Xcl1P47993 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.01□□□□□ -0.81
Xcl1P47993 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Xcl1P47993 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Xcl1P47993 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Gm14464-201ENSMUST00000119658 1254 ntBASIC10□□□□□ -0.81
Xcl1P47993 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Nupl1-207ENSMUST00000225311 2475 ntBASIC10□□□□□ -0.81
Xcl1P47993 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10□□□□□ -0.81
Xcl1P47993 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Xcl1P47993 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC9.99□□□□□ -0.81
Xcl1P47993 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Mypopos-202ENSMUST00000205975 2321 ntBASIC9.99□□□□□ -0.81
Xcl1P47993 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.99□□□□□ -0.81
Xcl1P47993 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Xcl1P47993 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Xcl1P47993 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms