Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdh4P39038 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh4P39038 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Cdh4P39038 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdh4P39038 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh4P39038 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdh4P39038 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh4P39038 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh4P39038 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.69□□□□□ -0.06
Cdh4P39038 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.69□□□□□ -0.06
Cdh4P39038 AC159093.1-201ENSMUST00000227779 380 ntBASIC14.69□□□□□ -0.06
Cdh4P39038 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdh4P39038 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
Cdh4P39038 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.69□□□□□ -0.06
Cdh4P39038 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdh4P39038 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdh4P39038 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Cdh4P39038 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.68□□□□□ -0.06
Cdh4P39038 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 App-207ENSMUST00000227737 2827 ntBASIC14.68□□□□□ -0.06
Cdh4P39038 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh4P39038 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Prob1-201ENSMUST00000097619 3021 ntBASIC14.68□□□□□ -0.06
Cdh4P39038 Gm13036-201ENSMUST00000117799 748 ntBASIC14.68□□□□□ -0.06
Cdh4P39038 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh4P39038 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdh4P39038 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh4P39038 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdh4P39038 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.68□□□□□ -0.06
Cdh4P39038 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdh4P39038 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdh4P39038 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdh4P39038 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.67□□□□□ -0.06
Cdh4P39038 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdh4P39038 Gm18489-201ENSMUST00000172565 551 ntBASIC14.67□□□□□ -0.06
Cdh4P39038 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.67□□□□□ -0.06
Cdh4P39038 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cdh4P39038 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cdh4P39038 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Cdh4P39038 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdh4P39038 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cdh4P39038 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms