Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sox5P35710 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sox5P35710 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sox5P35710 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Sox5P35710 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Sox5P35710 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.77■□□□□ 0.28
Sox5P35710 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Sox5P35710 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Gm23634-201ENSMUST00000175071 91 ntBASIC16.77■□□□□ 0.28
Sox5P35710 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.77■□□□□ 0.28
Sox5P35710 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sox5P35710 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox5P35710 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox5P35710 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Sox5P35710 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox5P35710 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sox5P35710 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sox5P35710 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox5P35710 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox5P35710 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sox5P35710 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.76■□□□□ 0.27
Sox5P35710 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.76■□□□□ 0.27
Sox5P35710 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.76■□□□□ 0.27
Sox5P35710 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sox5P35710 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Sox5P35710 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox5P35710 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sox5P35710 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.75■□□□□ 0.27
Sox5P35710 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
Sox5P35710 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.75■□□□□ 0.27
Sox5P35710 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.75■□□□□ 0.27
Sox5P35710 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.75■□□□□ 0.27
Sox5P35710 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Sox5P35710 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.75■□□□□ 0.27
Sox5P35710 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sox5P35710 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sox5P35710 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.74■□□□□ 0.27
Sox5P35710 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Sox5P35710 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Sox5P35710 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.74■□□□□ 0.27
Sox5P35710 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.74■□□□□ 0.27
Sox5P35710 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Sox5P35710 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Gm18622-201ENSMUST00000219361 595 ntBASIC16.74■□□□□ 0.27
Sox5P35710 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sox5P35710 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sox5P35710 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms