Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Hoxc5P32043 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Gm15165-201ENSMUST00000118140 502 ntBASIC14.27□□□□□ -0.13
Hoxc5P32043 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Hoxc5P32043 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.27□□□□□ -0.13
Hoxc5P32043 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Hoxc5P32043 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.27□□□□□ -0.13
Hoxc5P32043 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Hoxc5P32043 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.27□□□□□ -0.13
Hoxc5P32043 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.27□□□□□ -0.13
Hoxc5P32043 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Hoxc5P32043 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Gm7506-201ENSMUST00000207758 815 ntBASIC14.26□□□□□ -0.13
Hoxc5P32043 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Hoxc5P32043 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Hoxc5P32043 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.25□□□□□ -0.13
Hoxc5P32043 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.25□□□□□ -0.13
Hoxc5P32043 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.25□□□□□ -0.13
Hoxc5P32043 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.25□□□□□ -0.13
Hoxc5P32043 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Hoxc5P32043 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Hoxc5P32043 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.24□□□□□ -0.13
Hoxc5P32043 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Hoxc5P32043 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Hoxc5P32043 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms