Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PdgfbP31240 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfbP31240 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PdgfbP31240 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Gm12138-201ENSMUST00000122180 951 ntBASIC15.29■□□□□ 0.04
PdgfbP31240 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfbP31240 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.29■□□□□ 0.04
PdgfbP31240 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfbP31240 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PdgfbP31240 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.29■□□□□ 0.04
PdgfbP31240 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.29■□□□□ 0.04
PdgfbP31240 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.29■□□□□ 0.04
PdgfbP31240 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PdgfbP31240 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PdgfbP31240 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
PdgfbP31240 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.28■□□□□ 0.04
PdgfbP31240 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.28■□□□□ 0.04
PdgfbP31240 Gm29667-201ENSMUST00000190817 490 ntBASIC15.28■□□□□ 0.04
PdgfbP31240 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.28■□□□□ 0.04
PdgfbP31240 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PdgfbP31240 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PdgfbP31240 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.27■□□□□ 0.04
PdgfbP31240 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PdgfbP31240 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.27■□□□□ 0.04
PdgfbP31240 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PdgfbP31240 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.27■□□□□ 0.04
PdgfbP31240 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.27■□□□□ 0.04
PdgfbP31240 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Gm24694-201ENSMUST00000180054 110 ntBASIC15.27■□□□□ 0.04
PdgfbP31240 Gm27663-201ENSMUST00000184839 110 ntBASIC15.27■□□□□ 0.04
PdgfbP31240 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.27■□□□□ 0.04
PdgfbP31240 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.27■□□□□ 0.04
PdgfbP31240 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PdgfbP31240 Gm6180-201ENSMUST00000065243 498 ntBASIC15.27■□□□□ 0.04
PdgfbP31240 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PdgfbP31240 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PdgfbP31240 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.26■□□□□ 0.03
PdgfbP31240 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.26■□□□□ 0.03
PdgfbP31240 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.26■□□□□ 0.03
PdgfbP31240 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PdgfbP31240 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
PdgfbP31240 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.26■□□□□ 0.03
PdgfbP31240 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC15.26■□□□□ 0.03
PdgfbP31240 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
PdgfbP31240 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.26■□□□□ 0.03
PdgfbP31240 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.26■□□□□ 0.03
PdgfbP31240 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PdgfbP31240 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms