Protein–RNA interactions for Protein: P28311

Defa4, Alpha-defensin 4, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defa4P28311 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.51□□□□□ -0.73
Defa4P28311 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Defa4P28311 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Defa4P28311 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.5□□□□□ -0.73
Defa4P28311 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Defa4P28311 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.5□□□□□ -0.73
Defa4P28311 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Defa4P28311 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.5□□□□□ -0.73
Defa4P28311 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.5□□□□□ -0.73
Defa4P28311 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Defa4P28311 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.5□□□□□ -0.73
Defa4P28311 Gm5417-201ENSMUST00000079706 384 ntBASIC10.5□□□□□ -0.73
Defa4P28311 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Defa4P28311 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.5□□□□□ -0.73
Defa4P28311 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Defa4P28311 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Defa4P28311 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC10.49□□□□□ -0.73
Defa4P28311 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Defa4P28311 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Defa4P28311 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC10.48□□□□□ -0.73
Defa4P28311 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Defa4P28311 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Defa4P28311 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms