Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Ccl3P10855 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Gm6415-201ENSMUST00000118488 348 ntBASIC13.51□□□□□ -0.25
Ccl3P10855 Gm13223-201ENSMUST00000118609 747 ntBASIC13.51□□□□□ -0.25
Ccl3P10855 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.51□□□□□ -0.25
Ccl3P10855 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.51□□□□□ -0.25
Ccl3P10855 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Ccl3P10855 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.51□□□□□ -0.25
Ccl3P10855 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.51□□□□□ -0.25
Ccl3P10855 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccl3P10855 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccl3P10855 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.5□□□□□ -0.25
Ccl3P10855 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Gm12151-201ENSMUST00000121374 290 ntBASIC13.5□□□□□ -0.25
Ccl3P10855 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
Ccl3P10855 Gm9824-201ENSMUST00000178707 561 ntBASIC13.5□□□□□ -0.25
Ccl3P10855 Gm27618-201ENSMUST00000183671 60 ntBASIC13.5□□□□□ -0.25
Ccl3P10855 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.5□□□□□ -0.25
Ccl3P10855 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ccl3P10855 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ccl3P10855 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccl3P10855 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Ccl3P10855 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ccl3P10855 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gm27437-201ENSMUST00000183429 107 ntBASIC13.49□□□□□ -0.25
Ccl3P10855 Gm38225-201ENSMUST00000194001 393 ntBASIC13.49□□□□□ -0.25
Ccl3P10855 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.49□□□□□ -0.25
Ccl3P10855 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.49□□□□□ -0.25
Ccl3P10855 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.49□□□□□ -0.25
Ccl3P10855 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.49□□□□□ -0.25
Ccl3P10855 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ccl3P10855 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ccl3P10855 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.48□□□□□ -0.25
Ccl3P10855 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
Ccl3P10855 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccl3P10855 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccl3P10855 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccl3P10855 Gm17837-201ENSMUST00000186435 985 ntBASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms