Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
NefmP08553 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC22.68■■□□□ 1.22
NefmP08553 Gm10252-201ENSMUST00000209541 832 ntBASIC22.68■■□□□ 1.22
NefmP08553 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC22.68■■□□□ 1.22
NefmP08553 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC22.68■■□□□ 1.22
NefmP08553 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Gm10676-201ENSMUST00000098778 3221 ntBASIC22.68■■□□□ 1.22
NefmP08553 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC22.68■■□□□ 1.22
NefmP08553 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
NefmP08553 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC22.67■■□□□ 1.22
NefmP08553 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NefmP08553 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NefmP08553 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
NefmP08553 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC22.67■■□□□ 1.22
NefmP08553 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Gm7286-201ENSMUST00000182691 1007 ntBASIC22.67■■□□□ 1.22
NefmP08553 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NefmP08553 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
NefmP08553 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC22.66■■□□□ 1.22
NefmP08553 Gm10231-201ENSMUST00000181584 441 ntBASIC22.66■■□□□ 1.22
NefmP08553 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Gm10175-202ENSMUST00000208752 441 ntBASIC22.66■■□□□ 1.22
NefmP08553 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC22.66■■□□□ 1.22
NefmP08553 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC22.66■■□□□ 1.22
NefmP08553 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC22.66■■□□□ 1.22
NefmP08553 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NefmP08553 Ptprs-211ENSMUST00000223859 5588 ntBASIC22.66■■□□□ 1.22
NefmP08553 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NefmP08553 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NefmP08553 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NefmP08553 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NefmP08553 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
NefmP08553 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NefmP08553 Fbxl12-205ENSMUST00000140702 1555 ntBASIC22.65■■□□□ 1.22
NefmP08553 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC22.65■■□□□ 1.22
NefmP08553 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.65■■□□□ 1.22
NefmP08553 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NefmP08553 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
NefmP08553 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
NefmP08553 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
NefmP08553 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC22.65■■□□□ 1.22
NefmP08553 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
NefmP08553 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.22
NefmP08553 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC22.64■■□□□ 1.21
NefmP08553 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC22.64■■□□□ 1.21
NefmP08553 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
NefmP08553 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NefmP08553 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
NefmP08553 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms