Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ApoeP08226 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ApoeP08226 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ApoeP08226 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ApoeP08226 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ApoeP08226 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ApoeP08226 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Gm14722-201ENSMUST00000118943 689 ntBASIC14.53□□□□□ -0.08
ApoeP08226 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.53□□□□□ -0.08
ApoeP08226 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
ApoeP08226 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ApoeP08226 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ApoeP08226 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ApoeP08226 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ApoeP08226 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ApoeP08226 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.52□□□□□ -0.09
ApoeP08226 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.52□□□□□ -0.09
ApoeP08226 AC125350.1-201ENSMUST00000225115 903 ntBASIC14.52□□□□□ -0.09
ApoeP08226 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
ApoeP08226 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.52□□□□□ -0.09
ApoeP08226 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.52□□□□□ -0.09
ApoeP08226 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ApoeP08226 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
ApoeP08226 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.51□□□□□ -0.09
ApoeP08226 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ApoeP08226 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ApoeP08226 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Gm25406-201ENSMUST00000157599 105 ntBASIC14.51□□□□□ -0.09
ApoeP08226 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.51□□□□□ -0.09
ApoeP08226 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.51□□□□□ -0.09
ApoeP08226 Gm7889-201ENSMUST00000185591 958 ntBASIC14.51□□□□□ -0.09
ApoeP08226 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ApoeP08226 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.51□□□□□ -0.09
ApoeP08226 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ApoeP08226 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ApoeP08226 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ApoeP08226 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.5□□□□□ -0.09
ApoeP08226 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.5□□□□□ -0.09
ApoeP08226 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ApoeP08226 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
ApoeP08226 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
ApoeP08226 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ApoeP08226 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms