Protein–RNA interactions for Protein: P01728

Ig lambda-2 chain V region, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01728 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.03□□□□□ -0.48
P01728 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.03□□□□□ -0.48
P01728 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
P01728 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.03□□□□□ -0.48
P01728 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.03□□□□□ -0.48
P01728 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
P01728 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.03□□□□□ -0.48
P01728 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.03□□□□□ -0.48
P01728 Gm9987-201ENSMUST00000069768 567 ntBASIC12.03□□□□□ -0.48
P01728 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.03□□□□□ -0.48
P01728 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P01728 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
P01728 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
P01728 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.02□□□□□ -0.48
P01728 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
P01728 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
P01728 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
P01728 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
P01728 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Gm12008-201ENSMUST00000117791 755 ntBASIC12.02□□□□□ -0.49
P01728 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.02□□□□□ -0.49
P01728 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.02□□□□□ -0.49
P01728 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.02□□□□□ -0.49
P01728 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.02□□□□□ -0.49
P01728 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P01728 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01728 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.01□□□□□ -0.49
P01728 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
P01728 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P01728 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
P01728 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.01□□□□□ -0.49
P01728 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P01728 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.01□□□□□ -0.49
P01728 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Gm25406-201ENSMUST00000157599 105 ntBASIC12.01□□□□□ -0.49
P01728 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.01□□□□□ -0.49
P01728 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P01728 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
P01728 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.01□□□□□ -0.49
P01728 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.01□□□□□ -0.49
P01728 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.01□□□□□ -0.49
P01728 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01728 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms