Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sh2d1aO88890 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Gm27867-201ENSMUST00000184778 125 ntBASIC10.88□□□□□ -0.67
Sh2d1aO88890 Gm44454-201ENSMUST00000198541 138 ntBASIC10.88□□□□□ -0.67
Sh2d1aO88890 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sh2d1aO88890 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Gm25406-201ENSMUST00000157599 105 ntBASIC10.87□□□□□ -0.67
Sh2d1aO88890 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC10.87□□□□□ -0.67
Sh2d1aO88890 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sh2d1aO88890 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms