Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.15□□□□□ -0.3
Cldn1O88551 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cldn1O88551 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.15□□□□□ -0.3
Cldn1O88551 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.15□□□□□ -0.3
Cldn1O88551 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.15□□□□□ -0.3
Cldn1O88551 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cldn1O88551 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Gm11745-201ENSMUST00000121669 448 ntBASIC13.15□□□□□ -0.3
Cldn1O88551 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cldn1O88551 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cldn1O88551 Gm45612-201ENSMUST00000211320 160 ntBASIC13.15□□□□□ -0.3
Cldn1O88551 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.15□□□□□ -0.3
Cldn1O88551 Gm7787-201ENSMUST00000216858 688 ntBASIC13.15□□□□□ -0.3
Cldn1O88551 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.15□□□□□ -0.3
Cldn1O88551 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Cldn1O88551 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cldn1O88551 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cldn1O88551 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cldn1O88551 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Cldn1O88551 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.15□□□□□ -0.31
Cldn1O88551 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cldn1O88551 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cldn1O88551 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Cldn1O88551 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.14□□□□□ -0.31
Cldn1O88551 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cldn1O88551 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Gm15427-201ENSMUST00000117288 531 ntBASIC13.14□□□□□ -0.31
Cldn1O88551 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.14□□□□□ -0.31
Cldn1O88551 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.14□□□□□ -0.31
Cldn1O88551 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.14□□□□□ -0.31
Cldn1O88551 Gm9682-201ENSMUST00000197505 556 ntBASIC13.14□□□□□ -0.31
Cldn1O88551 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.14□□□□□ -0.31
Cldn1O88551 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cldn1O88551 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cldn1O88551 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cldn1O88551 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cldn1O88551 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cldn1O88551 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Cldn1O88551 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cldn1O88551 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cldn1O88551 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms