Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capns1O88456 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capns1O88456 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.24□□□□□ -0.13
Capns1O88456 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.24□□□□□ -0.13
Capns1O88456 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capns1O88456 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Capns1O88456 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Capns1O88456 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.23□□□□□ -0.13
Capns1O88456 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Capns1O88456 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Capns1O88456 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Capns1O88456 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Capns1O88456 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Capns1O88456 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Capns1O88456 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Capns1O88456 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.22□□□□□ -0.13
Capns1O88456 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Capns1O88456 Birc2-201ENSMUST00000054878 378 ntBASIC14.22□□□□□ -0.13
Capns1O88456 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.22□□□□□ -0.13
Capns1O88456 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.22□□□□□ -0.13
Capns1O88456 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Capns1O88456 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.21□□□□□ -0.13
Capns1O88456 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Capns1O88456 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Capns1O88456 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.21□□□□□ -0.13
Capns1O88456 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.21□□□□□ -0.13
Capns1O88456 AW822252-206ENSMUST00000208904 237 ntBASIC14.21□□□□□ -0.13
Capns1O88456 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms