Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.82□□□□□ -0.68
Vamp8O70404 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Vamp8O70404 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Vamp8O70404 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Vamp8O70404 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Vamp8O70404 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Vamp8O70404 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Vamp8O70404 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC10.81□□□□□ -0.68
Vamp8O70404 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.81□□□□□ -0.68
Vamp8O70404 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Vamp8O70404 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Vamp8O70404 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Gm11927-201ENSMUST00000118472 759 ntBASIC10.8□□□□□ -0.68
Vamp8O70404 Gm24841-201ENSMUST00000158676 357 ntBASIC10.8□□□□□ -0.68
Vamp8O70404 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Cdc34b-202ENSMUST00000188741 1252 ntBASIC10.8□□□□□ -0.68
Vamp8O70404 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC10.8□□□□□ -0.68
Vamp8O70404 Gm44549-201ENSMUST00000208351 577 ntBASIC10.8□□□□□ -0.68
Vamp8O70404 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Vamp8O70404 AC093043.1-201ENSMUST00000226700 898 ntBASIC10.8□□□□□ -0.68
Vamp8O70404 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Vamp8O70404 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms