Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.91□□□□□ -0.34
Ccr6O54689 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccr6O54689 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccr6O54689 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccr6O54689 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccr6O54689 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ccr6O54689 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ccr6O54689 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Mir1199-201ENSMUST00000117015 119 ntBASIC12.9□□□□□ -0.34
Ccr6O54689 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccr6O54689 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.9□□□□□ -0.34
Ccr6O54689 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.9□□□□□ -0.34
Ccr6O54689 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Gm10566-201ENSMUST00000086739 996 ntBASIC12.9□□□□□ -0.34
Ccr6O54689 Gm10602-201ENSMUST00000098239 609 ntBASIC12.9□□□□□ -0.34
Ccr6O54689 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.9□□□□□ -0.34
Ccr6O54689 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
Ccr6O54689 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ccr6O54689 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccr6O54689 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccr6O54689 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ccr6O54689 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.89□□□□□ -0.35
Ccr6O54689 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccr6O54689 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccr6O54689 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Ccr6O54689 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Ccr6O54689 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ccr6O54689 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Ccr6O54689 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.89□□□□□ -0.35
Ccr6O54689 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.89□□□□□ -0.35
Ccr6O54689 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
Ccr6O54689 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Ccr6O54689 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccr6O54689 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.88□□□□□ -0.35
Ccr6O54689 Gm14722-201ENSMUST00000118943 689 ntBASIC12.88□□□□□ -0.35
Ccr6O54689 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccr6O54689 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.88□□□□□ -0.35
Ccr6O54689 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Ccr6O54689 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Ccr6O54689 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Ccr6O54689 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ccr6O54689 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms