Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Gm20553-201ENSMUST00000204205 844 ntBASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Gm17535J3KMR8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm17535J3KMR8 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm17535J3KMR8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm17535J3KMR8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Rpph1-201ENSMUST00000175096 319 ntBASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Gm45612-201ENSMUST00000211320 160 ntBASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm17535J3KMR8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm17535J3KMR8 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm17535J3KMR8 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm17535J3KMR8 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm17535J3KMR8 Celf4-206ENSMUST00000224553 1729 ntBASIC16.23■□□□□ 0.19
Gm17535J3KMR8 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms