Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim55G3X8Y1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim55G3X8Y1 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim55G3X8Y1 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim55G3X8Y1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim55G3X8Y1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim55G3X8Y1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim55G3X8Y1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Gm10252-201ENSMUST00000209541 832 ntBASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim55G3X8Y1 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Gm27000-201ENSMUST00000182943 842 ntBASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Trmt13-210ENSMUST00000198454 880 ntBASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim55G3X8Y1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Gm15375-201ENSMUST00000119510 849 ntBASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim55G3X8Y1 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms