Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usf3B2RUQ2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usf3B2RUQ2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm11025-201ENSMUST00000140773 466 ntBASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm6257-201ENSMUST00000163864 910 ntBASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm25911-201ENSMUST00000157621 56 ntBASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Gm15590-201ENSMUST00000078419 552 ntBASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usf3B2RUQ2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.8□□□□□ -0.36
Usf3B2RUQ2 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms