Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm715-201ENSMUST00000117865 831 ntBASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav3n-3A0A0G2JEM0 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.65□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav3n-3A0A0G2JEM0 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms