Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6d-5A0A075B6B9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6d-5A0A075B6B9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6d-5A0A075B6B9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm5417-201ENSMUST00000079706 384 ntBASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm25406-201ENSMUST00000157599 105 ntBASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Mir5130-201ENSMUST00000175160 84 ntBASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav6d-5A0A075B6B9 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms