Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 AC163280.1-201ENSMUST00000228194 1100 ntBASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav4n-4A0A075B615 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav4n-4A0A075B615 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm21596-201ENSMUST00000178049 1316 ntBASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm7638-201ENSMUST00000121348 967 ntBASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm18421-201ENSMUST00000204122 625 ntBASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Gm10493-201ENSMUST00000097270 612 ntBASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 AC162938.1-201ENSMUST00000213140 2323 ntBASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav4n-4A0A075B615 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
Trav4n-4A0A075B615 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav4n-4A0A075B615 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms