Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clip2Q9Z0H8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Gm13597-201ENSMUST00000121239 375 ntBASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Mir8117-201ENSMUST00000184773 107 ntBASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Gm2213-201ENSMUST00000197485 688 ntBASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clip2Q9Z0H8 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gm4995-201ENSMUST00000117247 432 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gm10499-201ENSMUST00000174094 934 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gm18246-201ENSMUST00000221023 728 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Gm5867-201ENSMUST00000063197 592 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Clip2Q9Z0H8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Prob1-201ENSMUST00000097619 3021 ntBASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Clip2Q9Z0H8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Gm10175-201ENSMUST00000086013 645 ntBASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip2Q9Z0H8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clip2Q9Z0H8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clip2Q9Z0H8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clip2Q9Z0H8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms