Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ClcnkaQ9WUB7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Gm24589-201ENSMUST00000116692 94 ntBASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Gm8097-201ENSMUST00000117903 829 ntBASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ClcnkaQ9WUB7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Gm27459-201ENSMUST00000184860 107 ntBASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ClcnkaQ9WUB7 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ClcnkaQ9WUB7 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.15□□□□□ -0.14
ClcnkaQ9WUB7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms