Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Htra1Q9R118 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Htra1Q9R118 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.28□□□□□ -0.12
Htra1Q9R118 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.28□□□□□ -0.12
Htra1Q9R118 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Htra1Q9R118 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.28□□□□□ -0.12
Htra1Q9R118 Gm36967-201ENSMUST00000193814 266 ntBASIC14.28□□□□□ -0.12
Htra1Q9R118 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.28□□□□□ -0.12
Htra1Q9R118 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.28□□□□□ -0.12
Htra1Q9R118 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Htra1Q9R118 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Htra1Q9R118 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.27□□□□□ -0.12
Htra1Q9R118 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Htra1Q9R118 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Htra1Q9R118 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.27□□□□□ -0.12
Htra1Q9R118 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Htra1Q9R118 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Htra1Q9R118 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.27□□□□□ -0.13
Htra1Q9R118 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Htra1Q9R118 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Htra1Q9R118 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms