Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Gm7213-201ENSMUST00000215977 950 ntBASIC15.42■□□□□ 0.06
Trim42Q9D2H5 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim42Q9D2H5 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm6257-201ENSMUST00000163864 910 ntBASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm2274-201ENSMUST00000184539 609 ntBASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm37444-201ENSMUST00000193605 439 ntBASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Gm10812-201ENSMUST00000099864 546 ntBASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim42Q9D2H5 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim42Q9D2H5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim42Q9D2H5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Trim42Q9D2H5 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms