Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.72■□□□□ 0.27
Ssr1Q9CY50 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ssr1Q9CY50 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ssr1Q9CY50 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ssr1Q9CY50 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ssr1Q9CY50 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Ssr1Q9CY50 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.71■□□□□ 0.26
Ssr1Q9CY50 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ssr1Q9CY50 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Gm13836-201ENSMUST00000121159 501 ntBASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Gm6257-201ENSMUST00000163864 910 ntBASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ssr1Q9CY50 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ssr1Q9CY50 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms