Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Krt88Q9CPR6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Gm30025-201ENSMUST00000218555 728 ntBASIC13.9□□□□□ -0.18
Krt88Q9CPR6 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Krt88Q9CPR6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Krt88Q9CPR6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Krt88Q9CPR6 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Gm5417-201ENSMUST00000079706 384 ntBASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Krt88Q9CPR6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Krt88Q9CPR6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms