Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Mir6404-201ENSMUST00000183699 94 ntBASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm17807-201ENSMUST00000186869 298 ntBASIC14.94□□□□□ -0.02
Rnf111Q99ML9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf111Q99ML9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rnf111Q99ML9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.92□□□□□ -0.02
Rnf111Q99ML9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Gm44454-201ENSMUST00000198541 138 ntBASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rnf111Q99ML9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms