Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Gm24245-201ENSMUST00000157318 57 ntBASIC14.31□□□□□ -0.12
Cdca3Q99M54 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.31□□□□□ -0.12
Cdca3Q99M54 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Cdca3Q99M54 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm25990-201ENSMUST00000102440 86 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm13418-201ENSMUST00000119097 944 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm7230-201ENSMUST00000173026 815 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm4535-201ENSMUST00000182274 558 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm10355-201ENSMUST00000097146 517 ntBASIC14.3□□□□□ -0.12
Cdca3Q99M54 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Cdca3Q99M54 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.29□□□□□ -0.12
Cdca3Q99M54 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Gm37444-201ENSMUST00000193605 439 ntBASIC14.29□□□□□ -0.12
Cdca3Q99M54 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Cdca3Q99M54 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Gm14494-201ENSMUST00000118786 435 ntBASIC14.28□□□□□ -0.12
Cdca3Q99M54 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Gm6089-201ENSMUST00000197666 938 ntBASIC14.28□□□□□ -0.12
Cdca3Q99M54 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cdca3Q99M54 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms