Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Gm12260-201ENSMUST00000122447 411 ntBASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Gm5682-201ENSMUST00000173402 505 ntBASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ddx41Q91VN6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx41Q91VN6 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ddx41Q91VN6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Gm9727-201ENSMUST00000161387 555 ntBASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ddx41Q91VN6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.63■□□□□ 0.41
Ddx41Q91VN6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.63■□□□□ 0.41
Ddx41Q91VN6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ddx41Q91VN6 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ddx41Q91VN6 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ddx41Q91VN6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms