Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.06■□□□□ 0.32
Ddx39aQ8VDW0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Gm14722-201ENSMUST00000118943 689 ntBASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ddx39aQ8VDW0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Thap2-203ENSMUST00000218989 527 ntBASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ddx39aQ8VDW0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Gm15427-201ENSMUST00000117288 531 ntBASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC17.03■□□□□ 0.32
Ddx39aQ8VDW0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ddx39aQ8VDW0 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms