Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sox30Q8CGW4 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm12008-201ENSMUST00000117791 755 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm25745-201ENSMUST00000174945 133 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm27742-201ENSMUST00000184667 60 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.81■□□□□ 0.28
Sox30Q8CGW4 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 AC162938.1-201ENSMUST00000213140 2323 ntBASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Sox30Q8CGW4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Carlr-201ENSMUST00000181515 2574 ntBASIC16.79■□□□□ 0.28
Sox30Q8CGW4 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms