Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps9d1Q8C190 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Vps9d1Q8C190 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Gm38058-201ENSMUST00000194323 4368 ntBASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Vps9d1Q8C190 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Vps9d1Q8C190 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Vps9d1Q8C190 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Vps9d1Q8C190 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms