Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Gm2274-201ENSMUST00000184539 609 ntBASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Efs-202ENSMUST00000227037 2540 ntBASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3bQ8BHK2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm10052-201ENSMUST00000168019 960 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Mir6404-201ENSMUST00000183699 94 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm21814-202ENSMUST00000203277 873 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Gm7729-201ENSMUST00000050143 801 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3bQ8BHK2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm715-201ENSMUST00000117865 831 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Scn3bQ8BHK2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Scn3bQ8BHK2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms