Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clrn3Q8BHH8 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Gm4459-201ENSMUST00000118750 468 ntBASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clrn3Q8BHH8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Clrn3Q8BHH8 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clrn3Q8BHH8 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Gm8344-201ENSMUST00000119813 856 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clrn3Q8BHH8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms