Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Sh3tc2Q80VA5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Gm15427-201ENSMUST00000117288 531 ntBASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Sh3tc2Q80VA5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gm11745-201ENSMUST00000121669 448 ntBASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gm18489-201ENSMUST00000172565 551 ntBASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gm5177-201ENSMUST00000183092 997 ntBASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.72■□□□□ 0.27
Sh3tc2Q80VA5 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sh3tc2Q80VA5 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Sh3tc2Q80VA5 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sh3tc2Q80VA5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sh3tc2Q80VA5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms