Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdh19Q80TF3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdh19Q80TF3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.08■□□□□ 0.01
Pcdh19Q80TF3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh19Q80TF3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh19Q80TF3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh19Q80TF3 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdh19Q80TF3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.08■□□□□ 0
Pcdh19Q80TF3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC15.08■□□□□ 0
Pcdh19Q80TF3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.08■□□□□ 0
Pcdh19Q80TF3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.08■□□□□ 0
Pcdh19Q80TF3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdh19Q80TF3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.07■□□□□ 0
Pcdh19Q80TF3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.07■□□□□ 0
Pcdh19Q80TF3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Gm14822-201ENSMUST00000122247 291 ntBASIC15.07■□□□□ 0
Pcdh19Q80TF3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Gm8318-201ENSMUST00000182954 872 ntBASIC15.07■□□□□ 0
Pcdh19Q80TF3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdh19Q80TF3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Pcdh19Q80TF3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms