Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ush1gQ80T11 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.8■□□□□ 0.28
Ush1gQ80T11 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.8■□□□□ 0.28
Ush1gQ80T11 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.8■□□□□ 0.28
Ush1gQ80T11 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ush1gQ80T11 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.79■□□□□ 0.28
Ush1gQ80T11 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Gm27301-201ENSMUST00000184012 127 ntBASIC16.79■□□□□ 0.28
Ush1gQ80T11 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.79■□□□□ 0.28
Ush1gQ80T11 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.79■□□□□ 0.28
Ush1gQ80T11 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.79■□□□□ 0.28
Ush1gQ80T11 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ush1gQ80T11 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 App-207ENSMUST00000227737 2827 ntBASIC16.78■□□□□ 0.28
Ush1gQ80T11 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Gm13616-201ENSMUST00000120600 222 ntBASIC16.78■□□□□ 0.28
Ush1gQ80T11 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ush1gQ80T11 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.78■□□□□ 0.28
Ush1gQ80T11 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms