Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm37292-201ENSMUST00000192062 758 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm10517-202ENSMUST00000192970 758 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm20049-201ENSMUST00000219950 730 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-3Q5R1C3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Nupl1-207ENSMUST00000225311 2475 ntBASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Gm15378-201ENSMUST00000121894 207 ntBASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-3Q5R1C3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-3Q5R1C3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms